Solid Supports for the Synthesis of 3'-Aminooxy Deoxy- or Ribo-oligonucleotides and Their 3'-Conjugation by Oxime Ligation

  • J Org Chem. 2019 Nov 15;84(22):14854-14860. doi: 10.1021/acs.joc.9b00848.
Mathieu Noël  1 ,  Céline Clément-Blanc  1 ,  Albert Meyer  1 ,  Jean-Jacques Vasseur  1 ,  François Morvan  1
Affiliations
  • 1. Institut des Biomolécules Max Mousseron , Université de Montpellier, CNRS, ENSCM , Montpellier 34090 , France.
Abstract

Mono- and triethylene glycol aminooxy derivatives were reacted with levulinic acid, protected with dimethoxytrityl, and immobilized on solid support. The resulting solid supports were used for elongation of oligonucleotides. Then, a mild ammonia treatment was applied to remove the oligonucleotide protecting groups, followed by a treatment with 50 mM methoxyamine at pH 4.2, releasing the 3'-aminooxy oligonucleotides by an oxime exchange reaction. The resulting 3'-aminooxy deoxy- or ribo-oligonucleotides were conjugated to various ketones and aldehydes with high efficiency by oxime ligation.

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