Discovery of Potent, Highly Selective, and In Vivo Efficacious, Allosteric MALT1 Inhibitors by Iterative Scaffold Morphing

  • J Med Chem. 2020 Dec 10;63(23):14576-14593. doi: 10.1021/acs.jmedchem.0c01245.
Carole Pissot Soldermann  1 ,  Oliver Simic  1 ,  Martin Renatus  1 ,  Paulus Erbel  1 ,  Samu Melkko  1 ,  Markus Wartmann  1 ,  Marc Bigaud  1 ,  Andreas Weiss  1 ,  Paul McSheehy  2 ,  Ralf Endres ,  Paulo Santos ,  Jutta Blank  1 ,  Ansgar Schuffenhauer  1 ,  Guido Bold  1 ,  Nicole Buschmann  1 ,  Thomas Zoller  1 ,  Eva Altmann  1 ,  Paul W Manley  1 ,  Ina Dix  1 ,  Elisabeth Buchdunger  1 ,  Julien Scesa  1 ,  Jean Quancard  1 ,  Achim Schlapbach  1 ,  Frédéric Bornancin  1 ,  Thomas Radimerski  2 ,  Catherine H Régnier  1
Affiliations
  • 1. Novartis Institutes for BioMedical Research, Novartis Campus, CH-4002 Basel, Switzerland.
  • 2. Basilea Pharmaceutica, CH-4002 Basel, Switzerland.
Abstract

MALT1 plays a central role in immune cell activation by transducing NF-κB signaling, and its proteolytic activity represents a key node for therapeutic intervention. Two cycles of scaffold morphing of a high-throughput biochemical screening hit resulted in the discovery of MLT-231, which enabled the successful pharmacological validation of MALT1 allosteric inhibition in preclinical models of humoral immune responses and B-cell lymphomas. Herein, we report the structural activity relationships (SARs) and analysis of the physicochemical properties of a pyrazolopyrimidine-derived compound series. In human T-cells and B-cell lymphoma lines, MLT-231 potently and selectively inhibits the proteolytic activity of MALT1 in NF-κB-dependent assays. Both in vitro and in vivo profiling of MLT-231 support further optimization of this in vivo tool compound toward preclinical characterization.

Products
  • Cat. No.
    Product Name
    Description
    Target
    Research Area
  • 99.55%, MALT1 Inhibitor
    target: MALT1
    Research Areas: Cancer